A domain Ontology developped in order to integrate some Biological DBs of the budding yeast Sccharomyces cerevisae.
From Yeastract
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From Yeastract
also called ORF in this Ontology
From Yeastract
From SGD
From SGD
From SGD
Protein with no similarity to known proteins
From CYGD-MIPS
From SGD
From SGD
From SGD
From SGD
Protein having strong similarity to known proteins
interaction_data.tab
From CYGD-MIPS
From CYGD-MIPS
From SGD
Protein having similarity or weak similarity to known Proteins
From SGD
From SGD
interaction_data.tab
From SGD
From SGD
From SGD
From SGD
From SGD
From SGD
From Yeastract
From SGD
From Yeastract
From SGD
From SGD
From Yeastract
From SGD
From SGD
From CYGD-MIPS
From SGD
From SGD
From SGD
should be further detailed : indicates the type of physical or genetic interaction. Examples include two-hybrid analysis, affinity precipitation, affinity chromatography...
Extract sub-Classes from the file : interaction_data.tab column 5
From SGD
From SGD
From SGD
From SGD
From SGD
Protein having strong similarity to unkown proteins
From CYGD-MIPS
null
From SGD
From Yeastract
From SGD
From CYGD-MIPS
From YeastRact
A DNA Sequence has relative coordinates
From CYGD-MIPS
From CYGD-MIPS
From SGD
From SGD
From CYGD-MIPS
From Yeastract
From YeastRact
From SGD
From SGD
From YeastRact
From SGD
an Entry is an istance of a Source
From CYGD-MIPS
From SGD
From CYGD-MIPS
From CYGD-MIPS
From Yeastract
From SGD
From SGD
From SGD
From SGD
From BioGrid
From CYGD-MIPS
From SGD
From CYGD-MIPS
From SGD
From CYGD-MIPS
All products and chromosomal features have a defined sequence
From SGD
From SGD
From CYGD-MIPS
From Yeastract
From SGD
From CYGD-MIPS
From SGD
A source has several Entry
From SGD
From CYGD-MIPS
From Yeastract
From Yeastract
From SGD
Chromosomal features may have Subfeatures
From CYGD-MIPS
From SGD
From Yeastract
From SGD
From CYGD-MIPS
From SGD
From Yeastract
From Yeastract
From BioGrid
From YeastRact
A DNA Sequence has chromosomal coordinates
An Entry (in SGD) describes a specific Feature wich can be a chromosomal Feature or a kind of RNA
From CYGD-MIPS
From SGD
From CYGD-MIPS
From SGD
From BioGrid for interaction
From Yeastract
From SGD
From CYGD-MIPS
From SGD
From CYGD-MIPS
From CYGD-MIPS
From SGD
a feature is located on a chromosom
From SGD
From CYGD-MIPS (Contig)
From CYGD-MIPS
From SGD
From CYGD-MIPS (complete DNA Seq)
From CYGD-MIPS
From SGD
From Yeastract
From SGD
From CYGD-MIPS
From Yeastract
chromosomal Featres have GO Annotations
From SGD
From Yeastract
this is an inverse object property of hasGOAnnotation : A GO Annotation may annotate a chromosomal feature or a product
From SGD
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From CYGD-MIPS
From SGD
From BioGrid for the interaction
From SGD
From Yeastract
From SGD
From CYGD-MIPS
From Yeastract
BioGrid
From SGD
From CYGD-MIPS
From SGD
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From Yeastract
From SGD
From SGD
From SGD
From SGD
From SGD
From BioGrid
From CYGD-MIPS
From CYGD-MIPS
From CYGD-MIPS
From SGD
From CYGD-MIPS
From SGD
From SGD
From CYGD-MIPS
From CYGD-MIPS
From SGD
From SGD
From YeastRact
From SGD
From BioGrid for interaction
From Yeastract
From CYGD-MIPS
From SGD
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From CYGD-MIPS
From SGD
From SGD
From SGD
DNA Sequences or Coordinates end in a position represented by an integer
From SGD
From Yeastract
From SGD
From SGD
From CYGD-MIPS
From SGD (corresponds to the element chemical)
From CYGD-MIPS
From SGD
From SGD
From CYGD-MIPS
From Yeastract
From YeastRact
From SGD
From SGD
DNA Sequences or Coordinates begin at a position represented by an integer
From SGD
From SGD
From SGD
From Yeastract
From YeastRact
From SGD
From CYGD-MIPS
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From SGD
From SGD
From SGD
From CYGD-MIPS
From YeastRact
From SGD
From CYGD-MIPS
From SGD
From SGD
From SGD
From SGD
From CYGD-MIPS
From BioGrid
From SGD
From SGD
From SGD
From SGD
From SGD
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From Yeastract
From CYGD-MIPS
From Yeastract
From SGD
From CYGD-MIPS
From SGD
From SGD
From BioGrid
From SGD
From CYGD-MIPS
From SGD
From BioGrid
From SGD
From Yeastract for Gene Seq
From SGD
From CYGD-MIPS
From SGD
From SGD
From SGD
From SGD
From SGD
From BioGrid for interaction and interaction experiment
From CYGD-MIPS
From SGD
From CYGD-MIPS
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From Yeastract
From CYGD-MIPS
From SGD
From SGD
From CYGD-MIPS
From SGD
From SGD
From CYGD-MIPS
From BioGrid
From BioGrid
From Yeastract
From SGD